Hajibabaei, M., Porter, T.M., Robinson, C.V., Baird, D.J., Shokralla, S., & Wright, M. (2019). Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples. PLoS ONE 14(12): e0225409.

gaps paper

McGee, K.M., Robinson, C.V., & Hajibabaei, M. (2019). Gaps in DNA-Based biomonitoring across the globe. Frontiers in Ecology and Evolution, 7, 337.


Emilson et al 2017

Emilson, C.E., Thompson, D.G., Venier, L.A., Porter, T.M., Swystun, T., Chartrand, D., Capell, S., & Hajibabaei, M. (2017). DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient. Scientific Reports, 7, 12777. DOI:10.1038/s41598-017-13157-x.


Hajibabaei et al 2016

Hajibabaei, M., Baird, D.J., Fahner, N.A., Beiko, R., & Golding, G.B. (2016). A new way to contemplate Darwin’s tangled bank: how DNA barcodes are reconnecting biodiversity science and biomonitoring. Philosophical Transactions of the Royal Society B, 371, 20150330.

Gibson et al 2015

Gibson, J.F., Shokralla, S., Curry, C., Baird, D.J., Monk, W.A., King, I., & Hajibabaei, M. (2015). Large-scale biomonitoring of remote and threatened ecosystems via high-throughput sequencing. PLoS ONE 10(10): e0138432.

Hajibabaei et al 2012

Hajibabaei, M., Spall, J.L., Shokralla, S., & van Konynenburg, S. (2012). Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol. BMC Ecology, 12, 28.

Shokralla et al 2012

Shokralla, S., Spall, J.L., Gibson, J.F., & Hajibabaei, M. (2012). Next-generation sequencing technologies for environmental DNA research. Molecular Ecology, 21(8), 1794-1805.

Baird & Hajibabaei 2012

Baird, D.J., & Hajibabaei, M. (2012). Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next‐generation DNA sequencing. Molecular Ecology, 21(8), 2039-2044.

Hajibabaei et al 2011

Hajibabaei, M., Shokralla, S., Zhou, X., Singer, G.A.C., & Baird, D.J. (2011). Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos. PLoS ONE, 6(4): e17497.


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